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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903508.1_cds_XP_016453601.1_47710
CDS Infomation

[gene=LOC107777944] [db_xref=GeneID:107777944] [protein=probable arabinose 5-phosphate isomerase] [protein_id=XP_016453601.1] [location=complement(join(26182..26338,27580..27803,28496..29146))] [gbkey=CDS]
Sequence

ATGGGGTCTCTTTCACCACCATATTTGGACTTCTCTCATAACTCAACAAAGCAAGATTCA
TCAATAAACCCAACAAAACTTCTCGATCTCTTCAAAGCCCAACAAAATTATCTCAATCAC
TTCTTTCAAAATCTTGATCTTTCCCAAACTTTAACATTCACCCAAACTCTCCTTAATGCC
AAAGGTACAATCTTTTTCACCGGTGTGGGAAAATCTGGATTTGTCGCCCAAAAAATCTCA
CAGACTCTTGTTTCTCTGGGTATCAAATCTGGGTTTTTATCCCCTGTGGATGCGCTCCAC
GGAGACATTGGCATTTTAGATCCTCAAGATATTTTGGTTATGTTTAGCAAGAGTGGGAAT
ACAGAAGAATTGTTAAAGCTTGTGCCTTGTGCAAAGGCTAAAAGGGTCTTTTTAATCTCG
GTTACTTCTGTAAAGCCTAATTGTTTGATGGGGTTGTGTGATCTGAATGTGCATTTGCCT
TTAGAGAGGGAATTATGCCCTTTTGATTTGGCACCTGTGACGTCTACTGCTATTCAAATG
GTATTTGGTGATACGGTTGCGATTGCATTAATGGGGGCAAGGAATTTGAGCAAAGAAGAG
TATGCTGCGAATCATCCTGCTGGTAGGATCGGGAAAAGCTTGATCTTTAAGGTGAGAGAT
GTGATGAAGAAGAAAGAAGAACTTCCAATTTGCAAGGAAGGAGATCTTATTATGGATCAA
CTAGTAGAGTTGACAAGCAAAGGATGCGGTTGCCTCCTTGTTATTGATGAGGAGTTTCAT
CTGCTAGGCACATTCACTGATGGTGATTTACGTCGGACATTGAAAGCCAGCGGGGAAGGA
ATCTTTAAGCTTACAGTAGGAGAAATGTGTAACAGGAAACCAAGGACAATTGATCCTGAT
GCTATGGCAGTTGATGCGATGCAGAAGATGGAGTCTCCGCCATCTCCAGTCCAATTCTTG
CCAGTTATTGATCAGGATAATGTTTTGATTGGTATTGTTACATTACATGGACTGGTCTCA
GCAGGCTTGTGA

Peptide Sequence

PEP ID

XP_016453601.1
PEP Infomation

PREDICTED: probable arabinose 5-phosphate isomerase [Nicotiana tabacum]
Sequence

MGSLSPPYLDFSHNSTKQDSSINPTKLLDLFKAQQNYLNHFFQNLDLSQTLTFTQTLLNA
KGTIFFTGVGKSGFVAQKISQTLVSLGIKSGFLSPVDALHGDIGILDPQDILVMFSKSGN
TEELLKLVPCAKAKRVFLISVTSVKPNCLMGLCDLNVHLPLERELCPFDLAPVTSTAIQM
VFGDTVAIALMGARNLSKEEYAANHPAGRIGKSLIFKVRDVMKKKEELPICKEGDLIMDQ
LVELTSKGCGCLLVIDEEFHLLGTFTDGDLRRTLKASGEGIFKLTVGEMCNRKPRTIDPD
AMAVDAMQKMESPPSPVQFLPVIDQDNVLIGIVTLHGLVSAGL

Transcript Sequence

Gene sequence data has not been registered.